STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006392Aa_trans domain-containing protein. (504 aa)    
Predicted Functional Partners:
PBRA_004066
Uncharacterized protein.
    
 0.768
PBRA_007150
Uncharacterized protein.
   
 0.745
PBRA_002104
Uncharacterized protein.
    
 0.698
PBRA_004866
GFO_IDH_MocA domain-containing protein.
   
  0.648
PBRA_008982
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.644
PBRA_003258
Uncharacterized protein.
    
 0.625
PBRA_003761
HDAC_interact domain-containing protein.
    
 0.618
PBRA_006778
Thioredoxin-like_fold domain-containing protein.
    
 0.618
PBRA_008330
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.618
PBRA_003966
RING-type domain-containing protein.
    
 0.617
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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