STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006422Uncharacterized protein. (1057 aa)    
Predicted Functional Partners:
PBRA_004449
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.734
PBRA_004187
Uncharacterized protein.
    
 0.657
PBRA_009315
Small nuclear ribonucleoprotein Sm D3.
    
 0.624
PBRA_004045
Uncharacterized protein.
    
 
 0.622
PBRA_009041
GPS domain-containing protein.
    
 
 0.622
PBRA_008257
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.619
PBRA_005042
Sm domain-containing protein.
    
 0.617
PBRA_003752
Sm domain-containing protein.
    
  0.616
PBRA_007013
Uncharacterized protein.
    
  0.601
PBRA_001619
Small nuclear ribonucleoprotein G.
    
  0.600
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.