Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PBRA_001147 | PBRA_006370 | A0A0G4IVZ8 | A0A0G4IT33 | Importin N-terminal domain-containing protein. | Uncharacterized protein. | 0.538 |
PBRA_001901 | PBRA_002830 | A0A0G4J159 | A0A0G4J5I1 | Fe2OG dioxygenase domain-containing protein. | Uncharacterized protein. | 0.811 |
PBRA_001901 | PBRA_002851 | A0A0G4J159 | A0A0G4J685 | Fe2OG dioxygenase domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.938 |
PBRA_001901 | PBRA_004050 | A0A0G4J159 | A0A0G4IJD9 | Fe2OG dioxygenase domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.926 |
PBRA_001901 | PBRA_004943 | A0A0G4J159 | A0A0G4IME9 | Fe2OG dioxygenase domain-containing protein. | Structural maintenance of chromosomes protein. | 0.669 |
PBRA_001901 | PBRA_006370 | A0A0G4J159 | A0A0G4IT33 | Fe2OG dioxygenase domain-containing protein. | Uncharacterized protein. | 0.602 |
PBRA_002830 | PBRA_001901 | A0A0G4J5I1 | A0A0G4J159 | Uncharacterized protein. | Fe2OG dioxygenase domain-containing protein. | 0.811 |
PBRA_002830 | PBRA_002850 | A0A0G4J5I1 | A0A0G4ISS8 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.811 |
PBRA_002830 | PBRA_002851 | A0A0G4J5I1 | A0A0G4J685 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.995 |
PBRA_002830 | PBRA_004050 | A0A0G4J5I1 | A0A0G4IJD9 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.547 |
PBRA_002830 | PBRA_005313 | A0A0G4J5I1 | A0A0G4IN34 | Uncharacterized protein. | Histone domain-containing protein. | 0.811 |
PBRA_002830 | PBRA_006370 | A0A0G4J5I1 | A0A0G4IT33 | Uncharacterized protein. | Uncharacterized protein. | 0.715 |
PBRA_002830 | PBRA_006646 | A0A0G4J5I1 | A0A0G4ITG7 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.811 |
PBRA_002850 | PBRA_002830 | A0A0G4ISS8 | A0A0G4J5I1 | Histone H3; Belongs to the histone H3 family. | Uncharacterized protein. | 0.811 |
PBRA_002850 | PBRA_002851 | A0A0G4ISS8 | A0A0G4J685 | Histone H3; Belongs to the histone H3 family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.987 |
PBRA_002850 | PBRA_004050 | A0A0G4ISS8 | A0A0G4IJD9 | Histone H3; Belongs to the histone H3 family. | Histone H2B; Belongs to the histone H2B family. | 0.963 |
PBRA_002850 | PBRA_004943 | A0A0G4ISS8 | A0A0G4IME9 | Histone H3; Belongs to the histone H3 family. | Structural maintenance of chromosomes protein. | 0.669 |
PBRA_002850 | PBRA_006370 | A0A0G4ISS8 | A0A0G4IT33 | Histone H3; Belongs to the histone H3 family. | Uncharacterized protein. | 0.602 |
PBRA_002851 | PBRA_001901 | A0A0G4J685 | A0A0G4J159 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Fe2OG dioxygenase domain-containing protein. | 0.938 |
PBRA_002851 | PBRA_002830 | A0A0G4J685 | A0A0G4J5I1 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.995 |
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