STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006642Apt1 domain-containing protein. (313 aa)    
Predicted Functional Partners:
PBRA_008062
Tr-type G domain-containing protein.
   
 0.764
PBRA_006182
MRP-S28 domain-containing protein.
   
 0.662
PBRA_002246
Uncharacterized protein.
    
 0.631
PBRA_006248
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
 0.629
PBRA_003940
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.618
PBRA_004347
Uncharacterized protein.
    
  0.616
PBRA_008506
Tr-type G domain-containing protein.
   
 0.609
PBRA_007927
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.607
PBRA_005219
Uncharacterized protein.
    
  0.573
PBRA_000188
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
  0.530
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
Server load: low (26%) [HD]