STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_001091Uncharacterized protein. (778 aa)    
Predicted Functional Partners:
PBRA_009394
t-SNARE coiled-coil homology domain-containing protein.
    
 0.928
PBRA_007427
Uncharacterized protein.
    
 0.922
PBRA_003223
Uncharacterized protein.
    
 0.913
PBRA_002344
t-SNARE coiled-coil homology domain-containing protein.
    
 0.902
PBRA_006786
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.820
PBRA_000707
GRASP55_65 domain-containing protein.
   
 0.801
PBRA_007885
Uncharacterized protein.
   
 0.767
PBRA_009365
Uncharacterized protein.
   
 0.767
PBRA_001645
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.744
PBRA_003569
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.728
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.