STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_001071Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
PBRA_003384
Uncharacterized protein.
    
 
 0.951
PBRA_005258
3'-5' exonuclease domain-containing protein.
  
 0.724
PBRA_005635
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.724
PBRA_008413
3'-5' exonuclease domain-containing protein.
  
 0.724
PBRA_002626
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.682
PBRA_000929
RECA_2 domain-containing protein.
  
 
 0.679
PBRA_009686
Uncharacterized protein.
  
 0.670
PBRA_005282
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.670
PBRA_000699
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.670
PBRA_001076
Uncharacterized protein.
  
 0.670
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.