STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_001336FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (493 aa)    
Predicted Functional Partners:
PBRA_005705
Uncharacterized protein.
    
 0.834
PBRA_007197
Uncharacterized protein.
   
 0.817
PBRA_000985
Uncharacterized protein.
  
 0.791
PBRA_008784
ANK_REP_REGION domain-containing protein.
    
 0.778
PBRA_008783
ANK_REP_REGION domain-containing protein.
    
 0.778
PBRA_005279
Uncharacterized protein; Belongs to the cytochrome b5 family.
    
 0.775
PBRA_004032
Uncharacterized protein.
   
 
  0.749
PBRA_007578
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 0.749
PBRA_001890
Uncharacterized protein.
    
 0.749
PBRA_005160
Peptidase_M28 domain-containing protein.
  
 0.733
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.