STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_001333Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
PBRA_001793
AMPKBI domain-containing protein.
   
 0.812
PBRA_002277
Uncharacterized protein.
  
 0.687
PBRA_003369
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.674
PBRA_000009
MAPKKK7.
   
 0.594
PBRA_003551
Protein kinase domain-containing protein.
   
 0.594
PBRA_003550
Protein kinase domain-containing protein.
   
 0.594
PBRA_004311
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.594
PBRA_004460
Protein kinase domain-containing protein.
   
 0.594
PBRA_004605
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.594
PBRA_005034
Protein kinase domain-containing protein.
   
 0.594
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.