STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_001250eIF-5a domain-containing protein. (185 aa)    
Predicted Functional Partners:
PBRA_003726
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.999
PBRA_003653
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.999
PBRA_004759
Ribosomal_S10 domain-containing protein.
   
 
 0.999
PBRA_004955
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
PBRA_001328
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
PBRA_007403
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
PBRA_008276
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
PBRA_008963
Ribosomal_L18_c domain-containing protein.
   
 
 0.999
PBRA_003045
Uncharacterized protein.
   
 0.999
PBRA_003163
KH type-2 domain-containing protein.
   
 
 0.999
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.