Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM4 | A0A0G4IMS0 | A0A0G4IMI7 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | PBRA_001502 | A0A0G4IMS0 | A0A0G4IYK4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Sm domain-containing protein. | 0.999 |
| LSM1 | PBRA_001890 | A0A0G4IMS0 | A0A0G4J1S5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.769 |
| LSM1 | PBRA_002939 | A0A0G4IMS0 | A0A0G4J757 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.983 |
| LSM1 | PBRA_005876 | A0A0G4IMS0 | A0A0G4IRE3 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | WD_REPEATS_REGION domain-containing protein. | 0.774 |
| LSM1 | PBRA_007277 | A0A0G4IMS0 | A0A0G4IWK9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.869 |
| LSM1 | PBRA_007330 | A0A0G4IMS0 | A0A0G4IWK5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Nudix hydrolase domain-containing protein. | 0.730 |
| LSM1 | PBRA_007578 | A0A0G4IMS0 | A0A0G4IXJ9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.769 |
| LSM1 | PBRA_008637 | A0A0G4IMS0 | A0A0G4J2C4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.999 |
| LSM4 | LSM1 | A0A0G4IMI7 | A0A0G4IMS0 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
| LSM4 | PBRA_001502 | A0A0G4IMI7 | A0A0G4IYK4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Sm domain-containing protein. | 0.999 |
| LSM4 | PBRA_001890 | A0A0G4IMI7 | A0A0G4J1S5 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.787 |
| LSM4 | PBRA_002939 | A0A0G4IMI7 | A0A0G4J757 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.865 |
| LSM4 | PBRA_005876 | A0A0G4IMI7 | A0A0G4IRE3 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | WD_REPEATS_REGION domain-containing protein. | 0.704 |
| LSM4 | PBRA_007277 | A0A0G4IMI7 | A0A0G4IWK9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.892 |
| LSM4 | PBRA_007330 | A0A0G4IMI7 | A0A0G4IWK5 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nudix hydrolase domain-containing protein. | 0.710 |
| LSM4 | PBRA_007578 | A0A0G4IMI7 | A0A0G4IXJ9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.787 |
| LSM4 | PBRA_008637 | A0A0G4IMI7 | A0A0G4J2C4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.999 |
| PBRA_001502 | LSM1 | A0A0G4IYK4 | A0A0G4IMS0 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
| PBRA_001502 | LSM4 | A0A0G4IYK4 | A0A0G4IMI7 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
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