STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_007462ATG_C domain-containing protein. (1388 aa)    
Predicted Functional Partners:
PBRA_009164
Uncharacterized protein.
    
 0.981
PBRA_009677
Protein kinase domain-containing protein.
   
 0.941
PBRA_009682
Protein kinase domain-containing protein.
   
 0.941
PBRA_003309
Protein kinase domain-containing protein.
   
 0.941
PBRA_005839
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.936
PBRA_004974
WD_REPEATS_REGION domain-containing protein.
    
 
 0.795
PBRA_003420
ATG13 domain-containing protein.
    
 
 0.691
PBRA_001559
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.563
PBRA_005422
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
  
 0.555
PBRA_005791
Uncharacterized protein.
   
  
 0.543
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
Server load: low (26%) [HD]