STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_007777Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
PBRA_005945
LisH domain-containing protein.
  
 
 0.981
PBRA_008917
Uncharacterized protein.
   
 0.526
PBRA_004112
Uncharacterized protein.
    
  0.516
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
    
 0.507
PBRA_007729
Arf-GAP domain-containing protein.
    
 0.490
PBRA_007918
Uncharacterized protein.
    
 0.490
PBRA_002027
Uncharacterized protein.
    
 0.490
PBRA_009308
Uncharacterized protein.
    
 0.490
PBRA_008534
Cytochrome b5 heme-binding domain-containing protein.
  
 
 0.476
PBRA_000225
AAA domain-containing protein.
   
 
  0.458
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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