STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_007701CTP_transf_like domain-containing protein. (178 aa)    
Predicted Functional Partners:
PBRA_002463
Uncharacterized protein.
   
  0.939
PBRA_000271
Uncharacterized protein.
 
 
 0.798
PBRA_004032
Uncharacterized protein.
    
  0.749
PBRA_007433
Uncharacterized protein.
     
 0.714
PBRA_001772
Uncharacterized protein.
   
 0.678
PBRA_000368
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.637
PBRA_000922
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.637
PBRA_008621
Uncharacterized protein.
     
 0.636
PBRA_005202
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.635
PBRA_001023
Uncharacterized protein.
     
 0.635
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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