Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PBRA_001223 | PBRA_002094 | A0A0G4IVQ0 | A0A0G4J1G7 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.854 |
PBRA_001223 | PBRA_002552 | A0A0G4IVQ0 | A0A0G4J4T4 | Aspartate aminotransferase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.723 |
PBRA_001223 | PBRA_003187 | A0A0G4IVQ0 | A0A0G4J7C5 | Aspartate aminotransferase. | Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.708 |
PBRA_001223 | PBRA_003996 | A0A0G4IVQ0 | A0A0G4IJH3 | Aspartate aminotransferase. | Uncharacterized protein. | 0.723 |
PBRA_001223 | PBRA_004402 | A0A0G4IVQ0 | A0A0G4IKK1 | Aspartate aminotransferase. | Glutamine amidotransferase type-2 domain-containing protein. | 0.828 |
PBRA_001223 | PBRA_004439 | A0A0G4IVQ0 | A0A0G4IKE2 | Aspartate aminotransferase. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.869 |
PBRA_001223 | PBRA_004826 | A0A0G4IVQ0 | A0A0G4ILM8 | Aspartate aminotransferase. | Uncharacterized protein. | 0.759 |
PBRA_001223 | PBRA_006613 | A0A0G4IVQ0 | A0A0G4ITK4 | Aspartate aminotransferase. | Uncharacterized protein. | 0.708 |
PBRA_001223 | PBRA_006807 | A0A0G4IVQ0 | A0A0G4ITQ0 | Aspartate aminotransferase. | Aminotran_1_2 domain-containing protein. | 0.864 |
PBRA_001223 | PBRA_007932 | A0A0G4IVQ0 | A0A0G4IXZ2 | Aspartate aminotransferase. | Uncharacterized protein. | 0.736 |
PBRA_002094 | PBRA_001223 | A0A0G4J1G7 | A0A0G4IVQ0 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Aspartate aminotransferase. | 0.854 |
PBRA_002094 | PBRA_002552 | A0A0G4J1G7 | A0A0G4J4T4 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.677 |
PBRA_002094 | PBRA_003187 | A0A0G4J1G7 | A0A0G4J7C5 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.872 |
PBRA_002094 | PBRA_003996 | A0A0G4J1G7 | A0A0G4IJH3 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Uncharacterized protein. | 0.677 |
PBRA_002094 | PBRA_004402 | A0A0G4J1G7 | A0A0G4IKK1 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Glutamine amidotransferase type-2 domain-containing protein. | 0.816 |
PBRA_002094 | PBRA_004439 | A0A0G4J1G7 | A0A0G4IKE2 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.774 |
PBRA_002094 | PBRA_006613 | A0A0G4J1G7 | A0A0G4ITK4 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Uncharacterized protein. | 0.872 |
PBRA_002094 | PBRA_006807 | A0A0G4J1G7 | A0A0G4ITQ0 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Aminotran_1_2 domain-containing protein. | 0.776 |
PBRA_002094 | PBRA_007932 | A0A0G4J1G7 | A0A0G4IXZ2 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | Uncharacterized protein. | 0.735 |
PBRA_002552 | PBRA_001223 | A0A0G4J4T4 | A0A0G4IVQ0 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aspartate aminotransferase. | 0.723 |
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