STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_007715Uncharacterized protein. (793 aa)    
Predicted Functional Partners:
PBRA_003028
Bms1-type G domain-containing protein.
   
 
 0.995
PBRA_006619
Brix domain-containing protein.
   
   0.988
PBRA_001401
Uncharacterized protein.
   
 
 0.929
PBRA_006189
Uncharacterized protein.
   
 
0.921
PBRA_002748
WD_REPEATS_REGION domain-containing protein.
   
 
 0.914
PBRA_005574
Uncharacterized protein.
   
 
 0.899
PBRA_004328
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
  
 0.898
PBRA_000090
WD_REPEATS_REGION domain-containing protein.
   
   0.895
PBRA_005879
Uncharacterized protein.
   
 
 0.895
PBRA_007945
Uncharacterized protein.
   
 
 0.887
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.