STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_007975GLOBIN domain-containing protein; Belongs to the globin family. (894 aa)    
Predicted Functional Partners:
PBRA_008167
PBPb domain-containing protein.
    
0.677
PBRA_003680
Uncharacterized protein.
   
 0.639
PBRA_007838
Uncharacterized protein.
   
 0.639
PBRA_003220
Guanylate kinase-like domain-containing protein.
   
  0.609
PBRA_003514
Uncharacterized protein.
   
  0.609
PBRA_000965
Uncharacterized protein.
     
 0.491
PBRA_004713
WD_REPEATS_REGION domain-containing protein.
     
 0.479
PBRA_003554
WD_REPEATS_REGION domain-containing protein.
     
 0.466
PBRA_000591
Uncharacterized protein.
     
 0.466
PBRA_005959
Uncharacterized protein.
     
 0.466
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.