STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_008105PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family. (299 aa)    
Predicted Functional Partners:
PBRA_006616
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.641
PBRA_007360
Uncharacterized protein.
   
 0.641
PBRA_009395
Uncharacterized protein.
   
 0.641
PBRA_000665
Phosphodiesterase.
  
 
0.629
PBRA_004456
Guanylate cyclase domain-containing protein.
    
 0.623
PBRA_008735
Guanylate cyclase domain-containing protein.
    
 0.623
PBRA_003680
Uncharacterized protein.
    
 0.621
PBRA_007838
Uncharacterized protein.
    
 0.621
PBRA_005823
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
 0.556
PBRA_008638
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
    
 0.556
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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