STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_008277Uncharacterized protein. (1058 aa)    
Predicted Functional Partners:
PBRA_003384
Uncharacterized protein.
    
 0.824
PBRA_005418
Uncharacterized protein.
    
 0.775
PBRA_003069
RuvB-like helicase; Belongs to the RuvB family.
    
 0.732
PBRA_004579
Uncharacterized protein; Belongs to the actin family.
    
 0.728
PBRA_000673
Uncharacterized protein.
   
 0.727
PBRA_002626
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.723
PBRA_003542
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.720
PBRA_004009
RPOLD domain-containing protein.
   
 0.674
PBRA_001606
RPOLD domain-containing protein.
   
 0.674
PBRA_003131
Ubiquitin-like domain-containing protein.
    
 0.672
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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