STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_002126Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (461 aa)    
Predicted Functional Partners:
PBRA_007960
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 0.914
PBRA_007005
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
 0.912
PBRA_004101
Uncharacterized protein.
    
 
 0.827
PBRA_000984
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 
 0.823
PBRA_001361
Uncharacterized protein.
    
 
 0.821
PBRA_001171
Ribosomal_L18e/L15P domain-containing protein.
 
      0.819
PBRA_006115
Uncharacterized protein.
    
 
 0.817
PBRA_003910
NAD(P)-bd_dom domain-containing protein.
    
   0.815
PBRA_002033
Uncharacterized protein.
    
 
 0.815
PBRA_005913
zf-CHCC domain-containing protein.
    
   0.807
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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