STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_002020HECT domain-containing protein. (681 aa)    
Predicted Functional Partners:
PBRA_006780
Uncharacterized protein.
 
  
  0.931
PBRA_006936
Uncharacterized protein.
 
  
  0.931
PBRA_007848
Uncharacterized protein.
 
  
  0.931
PBRA_006915
Uncharacterized protein.
 
  
  0.911
PBRA_007286
Uncharacterized protein.
 
      0.899
PBRA_003364
Uncharacterized protein.
 
  
  0.843
PBRA_007807
Uncharacterized protein.
 
  
  0.800
PBRA_003680
Uncharacterized protein.
    
  0.734
PBRA_007838
Uncharacterized protein.
    
  0.734
PBRA_001010
Rap-GAP domain-containing protein.
    
 0.677
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.