STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_008725UDENN domain-containing protein. (870 aa)    
Predicted Functional Partners:
PBRA_000456
Uncharacterized protein.
  
 0.810
PBRA_005279
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.779
PBRA_005536
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.775
PBRA_000248
Uncharacterized protein.
     
 0.760
PBRA_003757
Uncharacterized protein.
     
 0.760
PBRA_004722
Cytochrome b5 heme-binding domain-containing protein.
     
 0.755
PBRA_000865
Uncharacterized protein.
  
 0.730
PBRA_002304
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.723
PBRA_002388
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.709
PBRA_006953
Uncharacterized protein.
  
 0.701
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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