STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_008796Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
PBRA_001318
GIDA_assoc domain-containing protein.
  
 0.866
PBRA_009619
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 0.845
PBRA_004692
Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.845
PBRA_006280
Uncharacterized protein.
  
 0.767
PBRA_006570
Uncharacterized protein.
  
 0.767
PBRA_007697
Uncharacterized protein.
  
 0.767
PBRA_001717
Flavokinase domain-containing protein.
  
 
  0.751
PBRA_004477
Stress-response A/B barrel domain-containing protein.
  
 
 0.722
PBRA_002489
DAO domain-containing protein.
  
 
 0.722
PBRA_002299
DAO domain-containing protein.
  
 
 0.722
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.