STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_008842Uncharacterized protein. (1315 aa)    
Predicted Functional Partners:
PBRA_002237
UDENN domain-containing protein.
    
 0.726
PBRA_004034
Uncharacterized protein.
    
 0.715
PBRA_007199
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.690
PBRA_007070
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.664
PBRA_000457
Uncharacterized protein.
    
 0.654
PBRA_006994
SAC domain-containing protein.
   
 
 0.622
PBRA_002086
Inositol-1-monophosphatase.
     
 0.619
PBRA_004662
PI3K/PI4K domain-containing protein.
     
 0.615
PBRA_006454
Phosphoinositide phospholipase C.
     
 0.611
PBRA_001952
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.602
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.