STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_009091CS domain-containing protein. (205 aa)    
Predicted Functional Partners:
PBRA_006791
Uncharacterized protein.
    
 0.796
PBRA_002319
Serine/threonine-protein kinase PLK.
    
 0.671
PBRA_004449
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.596
PBRA_001916
Uncharacterized protein.
     
 0.589
PBRA_003256
RanBD1 domain-containing protein.
   
 
 0.582
PBRA_008834
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
  0.577
PBRA_003020
Uncharacterized protein.
    
  0.573
PBRA_006381
WD_REPEATS_REGION domain-containing protein.
    
 0.566
PBRA_008269
40S ribosomal protein S27.
   
 
 0.563
PBRA_003614
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.561
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.