STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_002745Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
PBRA_003680
Uncharacterized protein.
    
 0.699
PBRA_007838
Uncharacterized protein.
    
 0.699
PBRA_008534
Cytochrome b5 heme-binding domain-containing protein.
    
 0.681
PBRA_004066
Uncharacterized protein.
    
 0.649
PBRA_006628
Uncharacterized protein.
    
  0.648
PBRA_007403
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
 
  
 0.648
PBRA_004759
Ribosomal_S10 domain-containing protein.
    
  0.639
PBRA_005219
Uncharacterized protein.
   
  0.639
PBRA_007197
Uncharacterized protein.
    
 0.638
PBRA_009540
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
 0.638
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.