STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_009196MFS domain-containing protein. (469 aa)    
Predicted Functional Partners:
PBRA_004032
Uncharacterized protein.
   
 0.786
PBRA_005279
Uncharacterized protein; Belongs to the cytochrome b5 family.
    
 0.742
PBRA_002943
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.624
PBRA_005457
Uncharacterized protein.
    
 0.607
PBRA_008761
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.607
PBRA_009455
Thymidine kinase.
    
 0.583
PBRA_005132
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
 0.552
PBRA_002712
Semialdhyde_dh domain-containing protein.
   
 0.537
PBRA_004642
TPR_REGION domain-containing protein.
    
 0.535
PBRA_000919
Uncharacterized protein.
    
 0.535
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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