STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_009212OBG-type G domain-containing protein. (479 aa)    
Predicted Functional Partners:
PBRA_001556
Uncharacterized protein.
  
 
 0.965
PBRA_004156
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.964
PBRA_002415
Uncharacterized protein.
  
 
 0.959
PBRA_001117
Uncharacterized protein.
  
 
 0.955
PBRA_009582
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.945
PBRA_005881
Uncharacterized protein.
   
 
 0.919
PBRA_008652
KOW domain-containing protein.
   
 
 0.916
PBRA_008486
Uncharacterized protein.
  
 
 0.909
PBRA_004336
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.900
PBRA_005236
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.900
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.