STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_002978Kin17_mid domain-containing protein. (377 aa)    
Predicted Functional Partners:
PBRA_001126
RRM domain-containing protein.
   
   0.852
PBRA_005309
SF3b1 domain-containing protein.
    
   0.829
PBRA_004900
Matrin-type domain-containing protein.
    
 
 0.800
PBRA_005063
Uncharacterized protein.
    
 
 0.788
PBRA_000669
Uncharacterized protein.
   
   0.725
PBRA_001550
Uncharacterized protein.
   
   0.725
PBRA_008129
Tr-type G domain-containing protein.
    
   0.700
PBRA_008782
Uncharacterized protein.
    
   0.700
PBRA_000363
Uncharacterized protein.
    
 0.681
PBRA_005231
Uncharacterized protein.
    
 0.681
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.