STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003030Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
PBRA_001729
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.978
PBRA_000268
Uncharacterized protein.
    
 0.923
PBRA_003608
Uncharacterized protein.
    
 0.729
PBRA_007885
Uncharacterized protein.
    
 0.685
PBRA_009365
Uncharacterized protein.
    
 0.685
PBRA_000786
Uncharacterized protein.
    
 0.678
PBRA_004406
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.677
PBRA_004985
Uncharacterized protein.
    
 0.676
PBRA_007385
Uncharacterized protein.
    
 0.676
PBRA_003206
Uncharacterized protein.
    
 0.676
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.