STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003134TPR_REGION domain-containing protein. (798 aa)    
Predicted Functional Partners:
PBRA_001726
Ubiquitin carboxyl-terminal hydrolase.
    
 0.687
PBRA_006505
DLH domain-containing protein.
    
 0.666
PBRA_006245
Uncharacterized protein.
    
 0.566
PBRA_005337
Uncharacterized protein.
    
 0.551
PBRA_004218
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.523
PBRA_003175
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.523
PBRA_003779
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.522
PBRA_006291
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.522
PBRA_007458
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.522
PBRA_007284
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.522
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.