STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003450Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family. (592 aa)    
Predicted Functional Partners:
PBRA_004794
PlsC domain-containing protein.
    
 0.899
PBRA_003062
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 
 0.834
PBRA_004032
Uncharacterized protein.
  
 
 0.823
PBRA_008720
TPR_REGION domain-containing protein.
    
 0.787
PBRA_003483
RING-type domain-containing protein.
     
 0.769
PBRA_006457
FMN hydroxy acid dehydrogenase domain-containing protein.
  
 0.768
PBRA_002399
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.768
PBRA_005279
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.751
PBRA_000748
Peroxin-13_N domain-containing protein.
   
 0.741
PBRA_003887
Uncharacterized protein.
    
 0.731
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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