STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003363Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
PBRA_005221
Uncharacterized protein.
  
 
 0.690
PBRA_002264
RRM domain-containing protein.
  
 
 0.690
PBRA_006424
Uncharacterized protein.
    
 0.687
PBRA_001793
AMPKBI domain-containing protein.
    
 0.677
PBRA_003185
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.634
PBRA_000169
RRM domain-containing protein.
  
 
 0.622
PBRA_008795
RRM domain-containing protein.
  
 
 
 0.621
PBRA_005641
Uncharacterized protein; Belongs to the cyclin family.
     
 0.592
PBRA_008631
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.592
PBRA_006004
Uncharacterized protein.
    
 0.589
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.