STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS79764.1Protein of unknown function. (194 aa)    
Predicted Functional Partners:
SIS79753.1
Hypothetical protein.
       0.794
SIT25918.1
Protein of unknown function.
  
     0.769
SIS95586.1
uroporphyrinogen-III synthase.
  
     0.746
SIT16405.1
RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.729
SIT14242.1
Hypothetical protein.
  
     0.707
SIT10560.1
Hypothetical protein.
 
     0.695
SIT03719.1
Protein of unknown function.
  
     0.684
rpsU
Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
 
   0.681
SIS78890.1
Protein of unknown function.
  
     0.677
SIS68417.1
Protein of unknown function.
  
     0.675
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.