STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS78630.1Thioredoxin reductase. (301 aa)    
Predicted Functional Partners:
SIT01413.1
Thioredoxin.
  
 0.794
SIT16171.1
Thioredoxin.
  
 0.794
SIT23605.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.794
SIT23110.1
Bacillithiol system protein YtxJ.
  
 0.689
SIS64099.1
Glycine dehydrogenase; Belongs to the GcvP family.
     
 0.665
SIS81729.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.657
SIT01400.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.657
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.631
SIT19342.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.510
SIT22454.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.510
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.