STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS92300.1Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (709 aa)    
Predicted Functional Partners:
SIS66157.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.524
SIS85311.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.522
surE
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.474
secD
Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
 
  0.462
SIS69035.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.429
SIS69808.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.429
SIS70246.1
SusD family protein.
    
  0.429
SIS70664.1
Hypothetical protein.
    
  0.429
SIS70696.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.429
SIS71715.1
Hypothetical protein.
    
  0.429
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.