STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT09234.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
    
  0.624
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.532
SIT17306.1
Catalase; Belongs to the catalase family.
   
 
 0.529
SIS59370.1
Yersiniabactin nonribosomal peptide synthetase.
   
 0.505
SIT04760.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.460
SIT15987.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.460
SIS64714.1
Choline dehydrogenase.
   
 
 0.449
SIT12581.1
Cholesterol oxidase.
   
 
 0.449
SIS58214.1
Predicted dehydrogenase.
  
 
 0.437
SIS63256.1
Predicted dehydrogenase.
  
 
 0.437
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.