STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT20021.1Surface antigen. (366 aa)    
Predicted Functional Partners:
SIT16396.1
Beta-barrel assembly machine subunit BamD.
  
 
 0.803
SIT20006.1
Lipid A 3-O-deacylase (PagL).
 
     0.776
SIT20014.1
Hypothetical protein.
       0.773
SIT19991.1
Histidine kinase.
       0.633
SIT19999.1
Two component transcriptional regulator, LytTR family.
       0.633
SIT16143.1
Regulator of sigma E protease.
  
  
 0.593
SIT20029.1
RteC protein.
       0.584
SIS52543.1
Hypothetical protein.
   
 
 0.578
SIS97311.1
Hypothetical protein.
   
 
 0.578
SIT03240.1
Hypothetical protein.
   
 
 0.578
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.