STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT25497.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
SIT25503.1
Hypothetical protein.
       0.723
SIT25493.1
Hypothetical protein.
       0.718
SIT25488.1
Hypothetical protein.
       0.694
SIT25508.1
Hypothetical protein.
       0.653
SIT25513.1
Hypothetical protein.
       0.611
SIT25518.1
Hypothetical protein.
       0.611
SIT25524.1
dnaA protein helix-turn-helix.
       0.611
SIT25528.1
Hypothetical protein.
       0.611
SIT25534.1
Hypothetical protein.
       0.558
SIT25540.1
Hypothetical protein.
       0.558
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.