STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT25458.1AAA domain-containing protein. (313 aa)    
Predicted Functional Partners:
SIT25455.1
Hypothetical protein.
 
     0.944
SIT25463.1
Hypothetical protein.
 
     0.896
SIT25471.1
Hypothetical protein.
       0.784
SIT25466.1
Hypothetical protein.
       0.780
SIT25573.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.750
SIT25575.1
Protein of unknown function.
 
   
 0.750
SIT25646.1
Hypothetical protein.
  
     0.673
SIT25668.1
Hypothetical protein.
  
     0.619
SIT25475.1
Protein of unknown function.
       0.544
SIS51895.1
Hypothetical protein.
  
 
 0.526
Your Current Organism:
Chryseobacterium ureilyticum
NCBI taxonomy Id: 373668
Other names: C. ureilyticum, CCUG 52546, CIP 110146, Chryseobacterium sp. F-Fue-04IIIaaaa, Chryseobacterium ureilyticum Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, DSM 18017, strain F-Fue-04IIIaaaa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.