Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS50566.1 | SIS50734.1 | SAMN05421785_1012 | SAMN05421785_10110 | YD repeat-containing protein. | McrBC 5-methylcytosine restriction system component. | 0.400 |
SIS50566.1 | SIS64060.1 | SAMN05421785_1012 | SAMN05421785_101676 | YD repeat-containing protein. | Thioredoxin. | 0.410 |
SIS50566.1 | SIS64078.1 | SAMN05421785_1012 | SAMN05421785_101677 | YD repeat-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.536 |
SIS50566.1 | SIS64095.1 | SAMN05421785_1012 | SAMN05421785_101678 | YD repeat-containing protein. | SusD family protein. | 0.556 |
SIS50566.1 | SIT28256.1 | SAMN05421785_1012 | SAMN05421785_1267 | YD repeat-containing protein. | RHS repeat-associated core domain-containing protein. | 0.784 |
SIS50566.1 | SIT28345.1 | SAMN05421785_1012 | SAMN05421785_1281 | YD repeat-containing protein. | RHS repeat-associated core domain-containing protein. | 0.764 |
SIS50734.1 | SIS50566.1 | SAMN05421785_10110 | SAMN05421785_1012 | McrBC 5-methylcytosine restriction system component. | YD repeat-containing protein. | 0.400 |
SIS50734.1 | SIS64060.1 | SAMN05421785_10110 | SAMN05421785_101676 | McrBC 5-methylcytosine restriction system component. | Thioredoxin. | 0.698 |
SIS50734.1 | SIS64078.1 | SAMN05421785_10110 | SAMN05421785_101677 | McrBC 5-methylcytosine restriction system component. | TonB-linked outer membrane protein, SusC/RagA family. | 0.728 |
SIS50734.1 | SIS64095.1 | SAMN05421785_10110 | SAMN05421785_101678 | McrBC 5-methylcytosine restriction system component. | SusD family protein. | 0.677 |
SIS50734.1 | SIS74791.1 | SAMN05421785_10110 | SAMN05421785_102334 | McrBC 5-methylcytosine restriction system component. | TonB-linked outer membrane protein, SusC/RagA family. | 0.403 |
SIS50734.1 | SIS74806.1 | SAMN05421785_10110 | SAMN05421785_102335 | McrBC 5-methylcytosine restriction system component. | Starch-binding associating with outer membrane. | 0.452 |
SIS64060.1 | SIS50566.1 | SAMN05421785_101676 | SAMN05421785_1012 | Thioredoxin. | YD repeat-containing protein. | 0.410 |
SIS64060.1 | SIS50734.1 | SAMN05421785_101676 | SAMN05421785_10110 | Thioredoxin. | McrBC 5-methylcytosine restriction system component. | 0.698 |
SIS64060.1 | SIS64078.1 | SAMN05421785_101676 | SAMN05421785_101677 | Thioredoxin. | TonB-linked outer membrane protein, SusC/RagA family. | 0.937 |
SIS64060.1 | SIS64095.1 | SAMN05421785_101676 | SAMN05421785_101678 | Thioredoxin. | SusD family protein. | 0.843 |
SIS64060.1 | SIS74806.1 | SAMN05421785_101676 | SAMN05421785_102335 | Thioredoxin. | Starch-binding associating with outer membrane. | 0.467 |
SIS64060.1 | SIT28345.1 | SAMN05421785_101676 | SAMN05421785_1281 | Thioredoxin. | RHS repeat-associated core domain-containing protein. | 0.709 |
SIS64078.1 | SIS50566.1 | SAMN05421785_101677 | SAMN05421785_1012 | TonB-linked outer membrane protein, SusC/RagA family. | YD repeat-containing protein. | 0.536 |
SIS64078.1 | SIS50734.1 | SAMN05421785_101677 | SAMN05421785_10110 | TonB-linked outer membrane protein, SusC/RagA family. | McrBC 5-methylcytosine restriction system component. | 0.728 |
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