Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS76022.1 | SIT09659.1 | SAMN05421785_102425 | SAMN05421785_106238 | Aspartate kinase. | Hypothetical protein. | 0.585 |
SIS76022.1 | SIT09669.1 | SAMN05421785_102425 | SAMN05421785_106239 | Aspartate kinase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.968 |
SIS76022.1 | SIT09690.1 | SAMN05421785_102425 | SAMN05421785_106241 | Aspartate kinase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.808 |
SIS76022.1 | SIT09704.1 | SAMN05421785_102425 | SAMN05421785_106242 | Aspartate kinase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.651 |
SIS76022.1 | SIT09730.1 | SAMN05421785_102425 | SAMN05421785_106244 | Aspartate kinase. | Acetylornithine deacetylase. | 0.467 |
SIS76022.1 | argB | SAMN05421785_102425 | SAMN05421785_106243 | Aspartate kinase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.543 |
SIS76022.1 | argC | SAMN05421785_102425 | SAMN05421785_106240 | Aspartate kinase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.635 |
SIS76022.1 | argH | SAMN05421785_102425 | SAMN05421785_106245 | Aspartate kinase. | Argininosuccinate lyase. | 0.569 |
SIS76022.1 | hisI | SAMN05421785_102425 | SAMN05421785_101439 | Aspartate kinase. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.850 |
SIS76022.1 | pyrB | SAMN05421785_102425 | SAMN05421785_106254 | Aspartate kinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.921 |
SIT09659.1 | SIS76022.1 | SAMN05421785_106238 | SAMN05421785_102425 | Hypothetical protein. | Aspartate kinase. | 0.585 |
SIT09659.1 | SIT09669.1 | SAMN05421785_106238 | SAMN05421785_106239 | Hypothetical protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.998 |
SIT09659.1 | SIT09690.1 | SAMN05421785_106238 | SAMN05421785_106241 | Hypothetical protein. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.862 |
SIT09659.1 | SIT09704.1 | SAMN05421785_106238 | SAMN05421785_106242 | Hypothetical protein. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.943 |
SIT09659.1 | SIT09730.1 | SAMN05421785_106238 | SAMN05421785_106244 | Hypothetical protein. | Acetylornithine deacetylase. | 0.898 |
SIT09659.1 | argB | SAMN05421785_106238 | SAMN05421785_106243 | Hypothetical protein. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.934 |
SIT09659.1 | argC | SAMN05421785_106238 | SAMN05421785_106240 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.963 |
SIT09659.1 | argH | SAMN05421785_106238 | SAMN05421785_106245 | Hypothetical protein. | Argininosuccinate lyase. | 0.906 |
SIT09659.1 | hisI | SAMN05421785_106238 | SAMN05421785_101439 | Hypothetical protein. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.673 |
SIT09659.1 | pyrB | SAMN05421785_106238 | SAMN05421785_106254 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.583 |
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