STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT13581.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SIT13567.1
Inward rectifier potassium channel.
       0.773
SIT19593.1
Peptidase family C25.
   
   0.634
SIT00895.1
Gliding motility associated protien GldN.
  
     0.569
SIT13614.1
Hypothetical protein.
       0.563
SIS56391.1
Mevalonate kinase.
  
     0.557
SIS89224.1
Mevalonate kinase.
  
     0.532
SIT13551.1
Hypothetical protein.
       0.477
SIS98394.1
Protein of unknown function.
  
     0.466
SIT19599.1
Gliding motility-associated lipoprotein GldJ.
  
     0.466
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.431
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
Server load: low (18%) [HD]