STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT17922.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SIT27353.1
Ribonuclease.
  
   0.822
SIT17892.1
Phosphoribosylformylglycinamidine synthase.
       0.747
SIT17939.1
Lysophospholipase L1.
       0.661
SIS55379.1
Helix-turn-helix.
  
     0.593
SIT10093.1
Dienelactone hydrolase.
  
     0.580
SIS82676.1
Hypothetical protein.
  
     0.577
SIS55402.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
     0.571
SIT21904.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.548
SIT20343.1
DNA-binding transcriptional regulator, MarR family.
  
     0.532
SIS75217.1
Regulatory protein, luxR family.
  
     0.525
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.