STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT21449.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
SIT21441.1
Hypothetical protein.
      
0.768
SIT13963.1
Hypothetical protein.
  
  0.550
SIT14169.1
Hypothetical protein.
  
  0.540
SIT28952.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.533
SIT21426.1
Hypothetical protein.
       0.504
SIT21433.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
       0.504
SIS71701.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.501
SIT13910.1
YARHG domain-containing protein.
  
     0.491
SIT21458.1
Hypothetical protein.
 
     0.486
SIS56784.1
Hypothetical protein.
   
  0.481
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.