STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT24373.1Glycosyltransferase involved in cell wall bisynthesis. (330 aa)    
Predicted Functional Partners:
SIT24339.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.819
SIT24379.1
EpsG family protein.
  
    0.775
SIT24390.1
Hypothetical protein.
 
    0.763
SIT24385.1
Hypothetical protein.
       0.744
SIT24396.1
Transferase hexapeptide (six repeat-containing protein).
  
 
  0.723
SIT24362.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.714
SIT24403.1
Polysaccharide transporter, PST family.
  
    0.705
SIT24367.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
  
 
  0.680
SIT24346.1
WxcM-like, C-terminal.
  
    0.638
SIT24357.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.635
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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