STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT24826.1Hypothetical protein; Belongs to the LOG family. (193 aa)    
Predicted Functional Partners:
SIT24830.1
ParE toxin of type II toxin-antitoxin system, parDE.
       0.705
SIT24835.1
Hypothetical protein.
       0.705
SIS51514.1
Release factor glutamine methyltransferase.
      0.677
SIT24821.1
Oligopeptidase B Serine peptidase. MEROPS family S09A.
       0.631
SIS89195.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
   
  0.481
SIS71352.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
    
  0.476
SIT24842.1
Dipeptidase D.
  
    0.472
SIT24850.1
Hypothetical protein.
       0.422
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.