STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT24723.1Hypothetical protein; Belongs to the pirin family. (300 aa)    
Predicted Functional Partners:
SIT24712.1
Uncharacterized membrane protein.
 
     0.768
SIT24700.1
Putative redox protein.
       0.734
SIT24694.1
Hypothetical protein.
       0.730
SIT24717.1
NAD(P)H-dependent FMN reductase.
       0.729
SIT24706.1
Uncharacterized Fe-S cluster protein YjdI.
       0.726
SIT20509.1
Hypothetical protein; Belongs to the pirin family.
 
     0.572
SIT24729.1
Hypothetical protein.
       0.565
SIT24735.1
Hypothetical protein; Belongs to the pirin family.
 
    
0.555
SIT24689.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.447
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.