STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT25847.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
SIT25843.1
Hypothetical protein.
 
    
0.795
SIT25851.1
Hypothetical protein.
 
    
0.750
SIS75010.1
Hypothetical protein.
  
     0.740
SIS95578.1
Hypothetical protein.
  
     0.739
SIT18972.1
Hypothetical protein.
  
 
   0.724
SIS96783.1
Hypothetical protein.
  
 
   0.714
SIS75024.1
Hypothetical protein.
  
     0.674
SIS75037.1
Hypothetical protein.
  
     0.674
SIS89275.1
Hypothetical protein.
  
 
   0.662
SIS73944.1
Hypothetical protein.
  
     0.645
Your Current Organism:
Chryseobacterium gambrini
NCBI taxonomy Id: 373672
Other names: C. gambrini, CCUG 52549, Chryseobacterium gambrini Herzog et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 5-1St1a, DSM 18014, strain 5-1St1a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.