STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL69048.1Ferredoxin hydrogenase; PFAM: 4Fe-4S binding domain; Iron only hydrogenase large subunit, C-terminal domain. (456 aa)    
Predicted Functional Partners:
ACL68942.1
PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; 4Fe-4S binding domain; 4Fe-4S binding domain.
   
 
 0.911
ACL69389.1
PFAM: 4Fe-4S binding domain; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit.
   
 
 0.909
ACL70678.1
Small GTP-binding protein; PFAM: GTPase of unknown function; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein Era; GTP-binding conserved hypothetical protein; small GTP-binding protein domain.
 
     0.699
ACL70663.1
Radical SAM domain protein; PFAM: Biotin and Thiamin Synthesis associated domain; Radical SAM superfamily.
 
  
 0.657
ACL70679.1
PFAM: Biotin and Thiamin Synthesis associated domain; Radical SAM superfamily; TIGRFAM: thiazole biosynthesis protein ThiH.
 
   
 0.589
ACL70827.1
PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.557
ACL68943.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only.
 
 
0.530
ACL69390.1
NADH dehydrogenase (ubiquinone) 75 kDa subunit; PFAM: Iron hydrogenase small subunit; 4Fe-4S binding domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: hydrogenases, Fe-only.
 
 
 
0.526
ACL69059.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only.
 
 
 
0.525
ACL68940.1
Serine/threonine specific protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
 
     0.482
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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