STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL69129.1PFAM: Sodium Bile acid symporter family. (315 aa)    
Predicted Functional Partners:
ACL70216.1
PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); arsenate reductase, glutathione/glutaredoxin type.
 
  
 0.813
ACL70218.1
PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.747
ACL69874.1
PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.456
ACL70542.1
PFAM: Ribose/Galactose Isomerase; Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.
  
  
 0.450
ACL69001.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Rhodanese-like domain; SirA-like protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Belongs to the sulfur carrier protein TusA family.
     
 0.429
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.